Citing BEAM

If BEAM is useful in your work, please cite:

T. Konstantinovsky and G. Yaari. A computable probability landscape for T cell receptor repertoire sampling and comparison. (Submitted.)

To cite the software itself, use its DOI, 10.5281/zenodo.23470065: it always resolves to the latest version, and each release has its own DOI on Zenodo for citing an exact version.

GitHub’s Cite this repository button on the BEAM repository gives the reference in BibTeX and APA, from its CITATION.cff file.

If you use the reference model, please also cite its Zenodo record (DOI listed by BEAM.pretrained_models()), and the studies whose data it was built from, listed in the paper’s Supplementary Information.